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Broad Institute Inc custom perl scripts
Custom Perl Scripts, supplied by Broad Institute Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/customized+perl+script/custom+perl+scripts/pm40650881-281-6-2
Average 90 stars, based on 1 article reviews
custom perl scripts - by Bioz Stars, 2026-11
90/100 stars

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Related Articles

Sequencing:

Article Title: The similarity of class II HLA genotypes defines patterns of autoreactivity in idiopathic bone marrow failure disorders.
Article Snippet: .. HED scores were computed for all the subjects and genotypes in the study using the algorithm published by Pierini and Lenz, applying a customized Perl script (https://sourceforge.net/projects/ granthamdist/) for the calculation of the amino acid sequence divergence at the antigen binding sites of HLA molecules.7,40 Briefly, starting from a dictionary including all the protein sequences of exons 2 and 3 for class I alleles and exon 2 for class II alleles, assembled from the IPD-IMGT/HLA database v.3.40,44 we calculated HED for 6 class I (A, B, C) and II HLA loci (DRB1, DQB1, DPB1). ..


Binding Assay:

Article Title: The similarity of class II HLA genotypes defines patterns of autoreactivity in idiopathic bone marrow failure disorders.
Article Snippet: .. HED scores were computed for all the subjects and genotypes in the study using the algorithm published by Pierini and Lenz, applying a customized Perl script (https://sourceforge.net/projects/ granthamdist/) for the calculation of the amino acid sequence divergence at the antigen binding sites of HLA molecules.7,40 Briefly, starting from a dictionary including all the protein sequences of exons 2 and 3 for class I alleles and exon 2 for class II alleles, assembled from the IPD-IMGT/HLA database v.3.40,44 we calculated HED for 6 class I (A, B, C) and II HLA loci (DRB1, DQB1, DPB1). ..

other:

Article Title: In silico comparative study of the genomic islands of Vibrio cholerae MJ1236 with those of Classical and El Tor N16961 strains of Vibrio cholerae.
Article Snippet: From these predicted regions of three V. cholerae strains the coding regions FEMS Microbiol Lett 321 (2011) 75–81c 2011 Federation of European Microbiological Societies Published by Blackwell Publishing Ltd. All rights reserved were marked out with the protein table as the reference available at the NCBI database using a customized PERL script.

Purification:

Article Title: Microbial responses to various process disturbances in a continuous hydrogen reactor fed with galactose.
Article Snippet: Sustainable Management of Natural Resources and Environment Research Group, Faculty of Environment and Labour Safety, Ton Duc Thang University, Ho Chi Minh City, Viet Nam, Department of Environmental Engineering, Daegu University, Gyeongsan, Gyeongbuk 712-714, South Korea, School of Civil, Environmental and Architectural Engineering, Korea University, Anam-Dong, Seongbuk-gu, Seoul 136-714, South Korea, and Department of Microbiology & Molecular Genetics, Michigan State University, East Lansing, MI 48824-4320, USA



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